Bio Dataome: a collection of uniformly preprocessed and automatically annotated datasets for data-driven biology
Welcome
BioDataome is a database of uniformly preprocessed and disease-annotated genomic
and epigenomic data with the aim to promote and accelerate the
reuse of public data. We followed the same preprocessing pipeline for each
biological mart (microarray gene expression, RNASeq gene expression, DNA methylation)
to produce ready for downstream analysis datasets and automatically annotated them with
Disease-Ontology terms. We also designate datasets that share common samples and
automatically discover control samples in case-control studies. Currently,
BioDataome includes 7320 datasets, 317433 samples spanning 847 diseases and can
be easily used in large scale massive experiments and meta-analysis. All datasets
are publicly available for querying and downloading.
Technologies
6
6
Homo sapiens
289292
out of 317433
samples
289292
out of 317433
samples
Mus musculus
28141 out of 317433
samples
28141 out of 317433
samples
GSE | Species | Entity | Technology | Type | Samples | Duplicates | Disease | ParentNode | ChildNode | Analyses | Annotation Version | Release Date | |
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